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healthy pumpkin muffin unwrapped on a table with chocolate chips
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5 from 1 vote

Healthy Pumpkin Muffins

Easy healthy pumpkin muffins made with one bowl! These simple muffins are gluten free and dairy free and make a great breakfast or snack. Add chocolate chunks or leave them plain!
Prep Time10 mins
Cook Time20 mins
Course: Breakfast
Cuisine: American
Keyword: almond flour muffins, chocolate chip muffins, dairy free, gluten free, paleo, pumpkin
Servings: 12 muffins
Calories: 239kcal


  • 1 15 ounce can pumpkin pure
  • 3 large eggs room temperature
  • 1 teaspoon vanilla extract
  • 1/4 cup coconut oil melted and cooled
  • ¼ cup creamy almond butter sugar free
  • 1/4 cup + 2 tablespoons maple syrup
  • 1 3/4 cups blanched almond flour
  • 1/2 cup tapioca flour starch
  • 1 teaspoon baking soda
  • 3/4 teaspoon baking powder
  • 2 teaspoons pumpkin pie spice
  • 1/2 teaspoon sea salt
  • 6 ounces dark chocolate chunks or 1 cup of walnuts optional


  • Preheat the oven to 350°F and line a 12-cup muffin pan with liners. Spray the liners with non stick spray and set aside.
  • In a large bowl whisk together the pumpkin, eggs, vanilla, coconut oil, creamy almond butter and maple syrup until combined.
    healthy pumpkin muffin wet ingredients in a clear bowl
  • Add the almond flour, tapioca flour, baking soda, baking powder, cinnamon and salt. Whisk to combine everything, being careful not to overmix or the muffins could become dense.
    dry ingredients in a bowl for pumpkin muffins
  • If using the chocolate chunks, add those to the batter and gently whisk to combine.
    chocolate chunks on top of healthy pumpkin muffin batter
  • Spoon the batter evenly into the prepared muffin tins all the way full. Bake in the preheated oven for 20-22 minutes or until a toothpick inserted in the center comes out clean or with a few crumbs attached.
  • Allow to cool in the muffin tins for 10 minutes then transfer to a wire cooling rack to cool completely. Serve warm with almond butter or grass fed butter.


I like to use Lily's Dark Chocolate or Enjoy Life chocolate chips/chunks!


Serving: 1muffin | Calories: 239kcal | Carbohydrates: 19.3g | Protein: 4.6g | Fat: 11g | Cholesterol: 47mg | Sodium: 261mg | Fiber: 1.7g | Sugar: 8.2g